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Database DNA sequences from VFDB core dataset (setA) Protein sequences from VFDB core dataset (setA) DNA sequences from VFDB full dataset (setB) Protein sequences from VFDB full dataset (setB) Program blastp blastx Enter sequence below in FASTA format Or load it from disk Set subsequence: From To
Advanced settings: Filter Low complexity Mask for lookup table only Expect 0.00001 0.0001 0.001 0.01 0.1 1 10 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF Other advanced options:
Graphical Overview Alignment view Pairwise master-slave with identities master-slave without identities flat master-slave with identities flat master-slave without identities BLAST XML Hit Table Descriptions 0 10 50 100 250 500 Alignments 0 10 50 100 250 500
