Customize genomes to be compared    [ Check All - Invert Selections - Clear All ] V. cholerae (2 genomes)  V. cholerae O1 biovar El Tor str. N16961 (O1 biovar eltor)  V. cholerae O395  V. fischeri (1 genome)  V. fischeri ES114  V. parahaemolyticus (1 genome)  V. parahaemolyticus RIMD 2210633  V. vulnificus (2 genomes)  V. vulnificus CMCP6  V. vulnificus YJ016

Comparative pathogenomics of Vibrio ( Total 6 genomes available )

Virulence factors

Related genes

V. cholerae O1 biovar El Tor str. N16961 (O1 biovar eltor)

V. cholerae O395

V. fischeri ES114

V. parahaemolyticus RIMD 2210633

V. vulnificus CMCP6

V. vulnificus YJ016

chromosome I   NC_002505

chromosome II   NC_002506

chromosome 1   NC_009457

chromosome 2   NC_009456

chromosome I   NC_006840

chromosome II   NC_006841

chromosome 1   NC_004603

chromosome 2   NC_004605

chromosome I   NC_004459

chromosome II   NC_004460

chromosome I   NC_005139

chromosome II   NC_005140

Adherence

ChiRP  (Chitin-regulated pilus)

pilA

VC_RS11670

VC0395_RS15350

VF_RS11375

VP_RS12235

VV1_RS07705

BJE04_RS13215

pilB

VC_RS11675

VC0395_RS15355

VF_RS11380

VP_RS12240

VV1_RS07700

BJE04_RS13220

pilC

VC_RS11680

VC0395_RS15360

VF_RS11385

VP_RS12245

VV1_RS07695

BJE04_RS13225

pilD/vcpD

VC_RS11685

VC0395_RS15365

VF_RS11390

VP_RS12250

VV1_RS07690

BJE04_RS13230

MSHA pili  (Mannose-sensitive hemagglutinin pili)

mshH

VC_RS02015

VC0395_RS19320

VF_RS01775

VP_RS13285

VV1_RS06770

BJE04_RS14180

mshI

VC_RS02020

VC0395_RS19325

VF_RS01780

VP_RS13280

VV1_RS06775

BJE04_RS14175

mshJ

VC_RS02025

VC0395_RS19330

VF_RS01785

VP_RS13275

VV1_RS06780

BJE04_RS14170

mshK

VC_RS02030

VC0395_RS19335

VF_RS01790

VP_RS13270

VV1_RS06785

BJE04_RS14165

mshL

VC_RS02035

VC0395_RS19340

VF_RS01795

VP_RS13265

VV1_RS06790

BJE04_RS14160

mshM

VC_RS02040

VC0395_RS19345

VF_RS01800

VP_RS13260

VV1_RS06795

BJE04_RS14155

mshN

VC_RS02045

VC0395_RS19350

VF_RS01805

VP_RS13255

VV1_RS06800

BJE04_RS14150

mshE

VC_RS02050

VC0395_RS19355

VF_RS01810

VP_RS13250

VV1_RS06805

BJE04_RS14145

mshG

VC_RS02055

VC0395_RS19360

VF_RS01815

VP_RS13245

VV1_RS06810

BJE04_RS14140

mshF

VC_RS02060

VC0395_RS19365

VF_RS01820

VP_RS13240

VV1_RS06815

BJE04_RS14135

mshB

VC_RS02065

VC0395_RS19370

VF_RS01825

VP_RS13235

VV1_RS06820

BJE04_RS14130

mshA

VC_RS02070

VC0395_RS19375

VF_RS01830

VP_RS13230

VV1_RS06825

BJE04_RS14125

mshC

VC_RS02075

VC0395_RS19380

VF_RS01835

VP_RS13225

VV1_RS06830

BJE04_RS14120

mshD

VC_RS02080

VC0395_RS19385

VF_RS01840

VP_RS13220

VV1_RS06835

BJE04_RS14115

TCP  (Toxin-coregulated pilus)

tcpA

VC_RS04120

VC0395_RS07115

VF_RS17830

tcpB

VC_RS04125

VC0395_RS07120

VF_RS17825

tcpQ

VC_RS04130

VC0395_RS07125

VF_RS17820

tcpC

VC_RS04135

VC0395_RS07130

VF_RS17815

tcpR

VC_RS04140

VC0395_RS20145

tcpD

VC_RS04145

VC0395_RS07140

VF_RS17805

tcpS

VC_RS04150

VC0395_RS07145

VF_RS17800

tcpT

VC_RS04155

VC0395_RS07150

VF_RS17795

tcpE

VC_RS04160

VC0395_RS07155

VF_RS17790

tcpF

VC_RS04165

VC0395_RS07160

VF_RS17785

tcpN/toxT

VC_RS04170

VC0395_RS07165

tcpJ

VC_RS04175

VC0395_RS07170

tcpI

VC_RS04105

VC0395_RS07100

tcpP

VC_RS04110

VC0395_RS07105

tcpH

VC_RS04115

VC0395_RS07110

Effector delivery system

Eps T2SS  (Extracellular protein secretion)

epsN

VC_RS13115

VC0395_RS16815

VF_RS12835

VP_RS00705

VV1_RS04180

BJE04_RS01395

epsM

VC_RS13120

VC0395_RS16820

VF_RS12840

VP_RS00700

VV1_RS04185

BJE04_RS01390

epsL

VC_RS13125

VC0395_RS16825

VF_RS12845

VP_RS00695

VV1_RS04190

BJE04_RS01385

epsK

VC_RS13130

VC0395_RS16830

VF_RS12850

VP_RS00690

VV1_RS04195

BJE04_RS01380

epsJ

VC_RS13135

VC0395_RS16835

VF_RS12855

VP_RS00685

VV1_RS04200

BJE04_RS01375

epsI

VC_RS13140

VC0395_RS16840

VF_RS12860

VP_RS00680

VV1_RS04205

BJE04_RS01370

epsH

VC_RS13145

VC0395_RS16845

VF_RS12865

VP_RS00675

VV1_RS04210

BJE04_RS01365

epsG

VC_RS13150

VC0395_RS16850

VF_RS12870

VP_RS00670

VV1_RS04215

BJE04_RS01360

epsF

VC_RS13155

VC0395_RS16855

VF_RS12875

VP_RS00665

VV1_RS04220

BJE04_RS01355

epsE

VC_RS13160

VC0395_RS16860

VF_RS12880

VP_RS00660

VV1_RS04225

BJE04_RS01350

epsD

VC_RS13165*

VC0395_RS16865

VF_RS12885

VP_RS00655

VV1_RS04230

BJE04_RS01345

epsC

VC_RS13170

VC0395_RS16870

VF_RS12890

VP_RS00650

VV1_RS04235

BJE04_RS01340

T3SS1

vopD

VP_RS07975

vopB

VP_RS07980

vcrH

VP_RS07985

vcrV

VP_RS07990

vcrG

VP_RS07995

vcrR

VP_RS08000

vcrD

VP_RS08005

vscY

VP_RS08010

vscX

VP_RS08015

sycN/vcr2

VP_RS08020

tyeA/vcr1

VP_RS08025

vopN

VP_RS08030

vscN

VP_RS08035

vscO

VP_RS08040

vscP

VP_RS08045

vscQ

VP_RS08050

vscR

VP_RS08055

vscS

VP_RS08060

vscT

VP_RS08065

vscU

VP_RS08070

vscL

VP_RS08125

vscK

VP_RS08130

vscJ

VP_RS08135

vscI

VP_RS08140

vscH

VP_RS08145

vscG

VP_RS08150

vscF

VP_RS08155

vscD

VP_RS08165

vscC

VP_RS08170

vscB

VP_RS08175

exsD

VP_RS08180

exsA

VP_RS08185

virG

VP_RS08190

vxsC

VP_RS08195

T3SS1 secreted effectors

vopS

VP_RS08115

vopR

VP_RS08105

vopQ

VP_RS08095

VPA0450

VP_RS17390

T3SS2

VPA1331

VP_RS21545

vscS2

VP_RS21560

vscN2

VP_RS21575

vscC2

VP_RS21580

vscT2

VP_RS21590

vscR2

VP_RS21595

vscQ2

VP_RS21625

vscU2

VP_RS21650

vcrD2

VP_RS21655

vopB2

VP_RS21690

vscJ2

VP_RS21715

-

VP_RS21765

T3SS2 secreted effectors

vopA/vopP

VP_RS21610

vopT

VP_RS21525

vopC

VP_RS21495

vopL

VP_RS21730

VAS T6SS

vasA

VC_RS13895

VC0395_RS00145

vasB

VC_RS13900

VC0395_RS00140

vasC

VC_RS13905

VC0395_RS00135

vasD

VC_RS13910

VC0395_RS00130

vasE

VC_RS13915

VC0395_RS00125*

vasF

VC_RS13920

VC0395_RS00120

clpB/vasG

VC_RS13925

VC0395_RS00115

vasH

VC_RS13930

VC0395_RS00110

vasI

VC_RS13935

VC0395_RS00105

vasJ

VC_RS13940

VC0395_RS00100

icmF/vasK

VC_RS13945

VC0395_RS00090*

VAS T6SS secreted effectors

hcp-1

VC_RS06845

VC0395_RS00580

hcp-2

VC_RS13490

VC0395_RS10480

vgrG-1

VC_RS06850

VC0395_RS10485

vgrG-2

VC_RS13495

VC0395_RS00575

vgrG-3

VC_RS13955

VC0395_RS00075

Motility

Flagella

flaC

VC_RS10575

VC0395_RS14255

VF_RS09680

VP_RS03880

VV1_RS01010

BJE04_RS04955

flaA

VC_RS10580

VC0395_RS14260

VF_RS09685

VP_RS03875

VV1_RS01020

BJE04_RS04945

flgL

VC_RS10585

VC0395_RS14270

VF_RS09690

VP_RS03870

VV1_RS01025

BJE04_RS04940

flgK

VC_RS10590

VC0395_RS14275

VF_RS09695

VP_RS03865

VV1_RS01030

BJE04_RS04935

flgJ

VC_RS10595

VC0395_RS14280

VF_RS09700

VP_RS03860

VV1_RS01035

BJE04_RS04930

flgI

VC_RS10600

VC0395_RS14285

VF_RS09705

VP_RS03855

VV1_RS01040

BJE04_RS04925

flgH

VC_RS10605

VC0395_RS14290

VF_RS09710

VP_RS03850

VV1_RS01045

BJE04_RS04920

flgG

VC_RS10610

VC0395_RS14295

VF_RS09715

VP_RS03845

VV1_RS01050

BJE04_RS04915

flgF

VC_RS10615

VC0395_RS14300

VF_RS09720

VP_RS03840

VV1_RS01055

BJE04_RS04910

flgE

VC_RS10620

VC0395_RS14305

VF_RS09725

VP_RS03835

VV1_RS01060

BJE04_RS04905

flgD

VC_RS10625

VC0395_RS14310

VF_RS09730

VP_RS03830

VV1_RS01065

BJE04_RS04900

flgC

VC_RS10630

VC0395_RS14315

VF_RS09735

VP_RS03825

VV1_RS01070

BJE04_RS04895

flgB

VC_RS10635

VC0395_RS14320

VF_RS09740

VP_RS03820

VV1_RS01075

BJE04_RS04890

cheR

VC_RS10640

VC0395_RS14325

VF_RS09745

VP_RS03815

VV1_RS01080

BJE04_RS04885

cheV

VC_RS10645

VC0395_RS14330

VF_RS09750

VP_RS03810

VV1_RS01085

BJE04_RS04880

flgA

VC_RS10650

VC0395_RS14335

VF_RS09755

VP_RS03805

VV1_RS01090

BJE04_RS04875

flgM

VC_RS10655

VC0395_RS14340

VF_RS09760

VP_RS03800

VV1_RS01095

BJE04_RS04870

flgN

VC_RS10660

VC0395_RS14345

VF_RS09765

VP_RS03795

VV1_RS01100

BJE04_RS04865

flhB

VC_RS10195

VC0395_RS13885

VF_RS09555

VP_RS10855

VV1_RS09220

BJE04_RS11755

fliR

VC_RS10200

VC0395_RS13890

VF_RS09560

VP_RS10860

VV1_RS09215

BJE04_RS11760

fliQ

VC_RS10205

VC0395_RS13895

VF_RS09565

VP_RS10865

VV1_RS09210

BJE04_RS11765

fliP

VC_RS10210

VC0395_RS13900

VF_RS09570

VP_RS10870

VV1_RS09205

BJE04_RS11770

fliO

VC_RS10215

VC0395_RS13905

VF_RS09575

VP_RS10875

VV1_RS09200

BJE04_RS11775

fliN

VC_RS10220

VC0395_RS13910

VF_RS09580

VP_RS10880

VV1_RS09195

BJE04_RS11780

fliM

VC_RS10225

VC0395_RS13915

VF_RS09585

VP_RS10885

VV1_RS09190

BJE04_RS11785

fliL

VC_RS10230

VC0395_RS13920

VF_RS09590

VP_RS10890

VV1_RS09185

BJE04_RS11790

fliK

VC_RS10235

VC0395_RS13925

VF_RS09595

VP_RS10895

VV1_RS09180

BJE04_RS11795

fliJ

VC_RS10245

VC0395_RS13930

VF_RS09600

VP_RS10900

VV1_RS09175

BJE04_RS11800

fliI

VC_RS10250

VC0395_RS13935

VF_RS09605

VP_RS10905

VV1_RS09170

BJE04_RS11805

fliH

VC_RS10255

VC0395_RS13940

VF_RS09610

VP_RS10910

VV1_RS09165

BJE04_RS11810

fliG

VC_RS10260

VC0395_RS13945

VF_RS09615

VP_RS10915

VV1_RS09160

BJE04_RS11815

fliF

VC_RS10265

VC0395_RS13950

VF_RS09620

VP_RS10920

VV1_RS09155

BJE04_RS11820

fliE

VC_RS10270

VC0395_RS13955

VF_RS09625

VP_RS10925

VV1_RS09150

BJE04_RS11825

fleR/flrC

VC_RS10275

VC0395_RS13960

VF_RS09630

VP_RS10930

VV1_RS09145

BJE04_RS11830

fleS/flrB

VC_RS10280

VC0395_RS13965

VF_RS09635

VP_RS10935

VV1_RS09140

BJE04_RS11835

flrA

VC_RS10285

VC0395_RS13970

VF_RS09640

VP_RS10940

VV1_RS09135

BJE04_RS11840

fliS

VC_RS10290

VC0395_RS13975

VF_RS09645

VP_RS10945

VV1_RS09130

BJE04_RS11845

flaI

VC_RS10295

VC0395_RS13980

VF_RS09650

VP_RS10950

VV1_RS09125

BJE04_RS11850

fliD

VC_RS10300

VC0395_RS13985

VF_RS09655

VP_RS10955

VV1_RS09120

BJE04_RS11855

flaG

VC_RS10305

VC0395_RS13990

VF_RS09660

VP_RS10960

VV1_RS09115

BJE04_RS11860

flaB

VC_RS10310

VC0395_RS13995

VF_RS09665

VP_RS10965

VV1_RS09110

BJE04_RS11865

flaD

VC_RS10315

VC0395_RS14000

VF_RS09670

VP_RS10970

VV1_RS09105

BJE04_RS11870

flaE

VC_RS10320

VC0395_RS14005

VF_RS09675

VP_RS10975

VV1_RS09100

BJE04_RS11875

cheW

VC_RS09920

VC0395_RS13605

VF_RS09495

VP_RS10800

VV1_RS09275

BJE04_RS11700

cheB

VC_RS09935

VC0395_RS20650

VF_RS09510

VP_RS10815

VV1_RS09260

BJE04_RS11715

cheA

VC_RS09940

VC0395_RS13625

VF_RS09515

VP_RS10820

VV1_RS09255

BJE04_RS11720

cheZ

VC_RS09945

VC0395_RS13630

VF_RS09520

VP_RS10825

VV1_RS09250

BJE04_RS11725

cheY

VC_RS09950

VC0395_RS13635

VF_RS09525

VP_RS10830

VV1_RS09245

BJE04_RS11730

fliA

VC_RS09955

VC0395_RS13640

VF_RS09530

VP_RS10835

VV1_RS09240

BJE04_RS11735

fleN/flhG

VC_RS09960

VC0395_RS13645

VF_RS09535

VP_RS10840

VV1_RS09235

BJE04_RS11740

flhF

VC_RS09965

VC0395_RS13650

VF_RS09540

VP_RS10845

VV1_RS09230

BJE04_RS11745

flhA

VC_RS09970

VC0395_RS13655

VF_RS09545

VP_RS10850

VV1_RS09225

BJE04_RS11750

motA

VC_RS04420

VC0395_RS07425

VF_RS03705

VP_RS03305

VV1_RS01540

BJE04_RS04425

motB

VC_RS04425

VC0395_RS07430

VF_RS03710

VP_RS03310

VV1_RS01535

BJE04_RS04430

motY

VC_RS04970

VC0395_RS07995

VF_RS04830

VP_RS10270

VV1_RS14725

BJE04_RS05960

motX

VC_RS12545

VC0395_RS16245

VF_RS12030

VP_RS13775

VV1_RS06190

BJE04_RS14770

Exotoxin

Ace  (Accessory cholera enterotoxin)

ace

VC_RS07065

VC0395_RS10675

VC0395_RS02445

VF_RS16365

CT  (Cholera toxin)

ctxA

VC_RS07055

VC0395_RS10665

VC0395_RS02455

ctxB

VC_RS07050

MARTX  (Multifunctional autoprocessing RTX toxin)

rtxA

VC_RS07025

VC0395_RS10655

VV1_RS17390

BJE04_RS20545

rtxC

VC_RS07020

VV1_RS17395

BJE04_RS20550

rtxB

VC_RS07010

VC0395_RS10650*

VV1_RS17405

BJE04_RS20560

rtxD

VC_RS07005

VC0395_RS10645

VV1_RS17410

BJE04_RS20565

TDH  (Thermostable direct hemolysin)

tdh

VP_RS21465   VP_RS21755

TLH  (Thermolabile hemolysin)

tlh

VC_RS14380

VC0395_RS04785

VP_RS16365

VV1_RS22005

BJE04_RS17230

VCC  (Vibrio cholerae cytolysin)

hlyA

VC_RS14385

VC0395_RS04780*

VvhA  (V. vulnificus hemolysin)

vvhA

VV1_RS17050

BJE04_RS20240

Zot  (Zonula occludens toxin)

zot

VC_RS07060

VC0395_RS10670

VC0395_RS02450

VF_RS16360

Exoenzyme

HAP  (Hemagglutinin protease)

hap/vvp

VC_RS17445

VC0395_RS01800

VV1_RS19655

BJE04_RS22495

NanH/VCNA  (Vibrio cholerae neuraminidase)

nanH

VC_RS08610

VC0395_RS12290

Immune modulation

Capsular polysaccharide

wza

VF_RS00790

VV1_RS03795

BJE04_RS01910

wzb

VF_RS00800

VV1_RS03785

BJE04_RS01920

wzc

VF_RS00805

VV1_RS03780

BJE04_RS01925

wecA

VF_RS00885

wecC

VC_RS04560

VC0395_RS07565

VV1_RS03770

BJE04_RS01935

wbjD/wecB

VC_RS04555

VC0395_RS07560

VV1_RS03775

BJE04_RS01930

wbuB

VV1_RS03735

wcaJ

BJE04_RS02030

wbfB

VF_RS00770

wbfC

VF_RS00775

wbfT

VF_RS00960

VV1_RS03730

wbfU

VC_RS01280

VC0395_RS18500

VF_RS00965

VV1_RS03725

wbfY

VC_RS01270

VC0395_RS18490

VF_RS00970

VV1_RS03720

BJE04_RS02045

wbfV/wcvB

VV1_RS03715

BJE04_RS02050

rmlB

VF_RS00810

BJE04_RS01730

rmlA

VF_RS00815

BJE04_RS01735

rmlD

BJE04_RS01740

rmlC

VF_RS00820

BJE04_RS01745

cpsA

VC_RS04635

VC0395_RS07645

VP_RS21870

VV1_RS22450

BJE04_RS17680

cpsB

VC_RS04640

VC0395_RS07650

VP_RS21875

VV1_RS22445

BJE04_RS17675

cpsC

VC_RS04645

VC0395_RS07655

VP_RS21880

VV1_RS22440

BJE04_RS17670

cpsD

VC_RS04650

VC0395_RS07660

VP_RS21885*

VV1_RS22435

BJE04_RS17665

cpsE

VP_RS21890

cpsF

VC_RS04605

VC0395_RS07615

VP_RS21895

VV1_RS22430

BJE04_RS17660

cpsG

VP_RS21900

cpsH

VP_RS21905

VV1_RS22425

BJE04_RS17655

cpsI

VP_RS21910

VV1_RS22420

BJE04_RS17650

cpsJ

VP_RS21915

VV1_RS22415

Biofilm

AI-2  (Autoinducer-2)

luxS

VC_RS02855

VC0395_RS05820

VF_RS02830

VP_RS12305

VV1_RS07635

BJE04_RS13285

CAI-1  (Cholerae autoinducer-1)

cqsA

VC_RS15920

VC0395_RS02200

VP_RS18595

Nutritional/Metabolic factor

Enterobactin receptor IrgA

irgA

VC_RS02435

VC0395_RS05515

VP_RS12660

Enterobactin receptor VctA

vctA

VC_RS14445*

VC0395_RS04720

VP_RS18375

Heme receptor HasR

hasR

VC_RS16375

VC0395_RS02720

Heme receptor HutA

hutA

VC_RS16165

VC0395_RS02495

VF_RS06390

VP_RS19400

VV1_RS16470*

BJE04_RS19440

Heme receptor HutR

hutR

VC_RS13690

VC0395_RS00365

VF_RS15125

VP_RS22180

VV1_RS22290

BJE04_RS17520

VctPDGC system

vctP

VC_RS14420

VC0395_RS04745

VP_RS18345

VV1_RS19030

BJE04_RS21795

vctD

VC_RS14425

VC0395_RS04740

VP_RS18350

VV1_RS15710

BJE04_RS18710

vctG

VC_RS14430

VC0395_RS04735

VP_RS18355

VV1_RS15715

BJE04_RS18715

vctC

VC_RS14435

VC0395_RS04730

VP_RS18360

VV1_RS15720

BJE04_RS18720

Vibriobactin receptor ViuA

viuA

VC_RS10690

VC0395_RS14375

VV1_RS19035

BJE04_RS21800

Vibriobactin/Vulnibactin

vibB

VC_RS03865

VC0395_RS06845

VV1_RS19010

BJE04_RS21775

vibE

VC_RS03870

VC0395_RS06850

VV1_RS19000

BJE04_RS21765

vibC

VC_RS03875

VC0395_RS06855

VV1_RS18995

BJE04_RS21760

vibA

VC_RS03880

VC0395_RS06860

VV1_RS18990

BJE04_RS21755

vibH

VC_RS03885

VC0395_RS06865

VV1_RS19040

BJE04_RS21805

vibD

VC_RS03910

VC0395_RS06890

VV1_RS18970

BJE04_RS21735

vibF

VC_RS10680*

VC0395_RS14365

VV1_RS18980

BJE04_RS21745

viuB

VC_RS10685

VC0395_RS14370

VV1_RS19005

BJE04_RS21770

ViuPDGC system

viuP

VC_RS03890

VC0395_RS06870

viuD

VC_RS03895

VC0395_RS06875

viuG

VC_RS03900

VC0395_RS06880

viuC

VC_RS03905

VC0395_RS06885

Others

ACF  (Accessory colonization factor)

acfA

VC_RS04200

VC0395_RS07195

acfB

VC_RS04180

VC0395_RS07175

acfC

VC_RS04185

VC0395_RS07180

acfD

VC_RS04205

VC0395_RS07205*

Download current table as EXCEL file

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